yxiE [2019-06-26 10:38:27]

unknown

Locus: BSU39250

Isoelectric point: 6.34

Molecular weight: 15.80 kDa

Protein length: 148 aa

Gene length: 447 bp

Function: unknown

Product: unknown

Essential: no

Synonyms

Genomic Context

Loading

Categories containing this gene/protein

• Groups of genes → Proteins of unknown function

Gene

Coordinates: 4,031,797 4,032,243

The protein

Protein family

• universal stress protein A family (with YxiE, according to UniProt)

Structure

• 3HGM (from Halomonas elongata, 35% identity) PubMed

Expression and Regulation

Operons

• Genes: bglP-bglH-yxiE
  Description: PubMed

  Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

  Regulatory mechanism

  • CcpA: repression, (CcpA binding site overlaps -35 region) PubMed, in CcpA regulon
  • LicT: anti-termination, via LicT-dependent RNA switch, lack of LicT-dependent antitermination in the presence of gucose due to the requirement of LicT to be phosphorylated by HprK, in LicT regulon

  Regulation

  • induced by salicin (LicT) PubMed

  Additional information

  • An [ncRNA|search|antisense RNA] is predicted for 'bglP' PubMed

Additional information

• the mRNA is cleaved by RNase III PubMed

Biological materials

Mutant

• MGNA-B788 (yxiE::erm), available at the NBRP B. subtilis, Japan
• BKE39250 (yxiE::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGCTCTTCCCGCCTTTCG, downstream forward: _UP4_TAGATTTGTAAAAAAAGCGC
• BKK39250 (yxiE::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGCTCTTCCCGCCTTTCG, downstream forward: _UP4_TAGATTTGTAAAAAAAGCGC

References

Loading